PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026386032.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB
Protein Properties Length: 339aa    MW: 38643.3 Da    PI: 7.0902
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026386032.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.81.8e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +lv +++q G+g+W++++   g+ R+ k+c++rw +yl
   XP_026386032.1 14 KGPWTPEEDIILVSYIQQNGPGNWRLVPTNTGLMRCSKSCRLRWTNYL 61
                     79********************************************97 PP
2Myb_DNA-binding43.57.2e-1467112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T+ E+  ++++  +lG++ W++Ia++++  Rt++++k++w+++l
   XP_026386032.1  67 RGNFTPHEEGMIIHLRSLLGNK-WAAIASYLP-QRTDNDIKNYWNTHL 112
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MGRPPCCDKV GIKKGPWTPE EDIILVSYIQ QNGPGNWRLV PTNTGLMRCS KSCRLRWTNY  60
LRPGIKRGNF TPHEEGMIIH LRSLLGNKWA AIASYLPQRT DNDIKNYWNT HLKKKINKFQ  120
SALNPPSPPL HQVIASNSTI FAHRHHDLCY TDKSDDRSTT NPSLLDHHIM INHGTTTTTS  180
GGATYASSTE NISRLLEGWM RSSPKLNSNK KYILPNTSPP IESNKEEETG NKLHHHEQES  240
CDIISSSHED FDSLLSFENM NCNIPWEKLS TSSNDIDLDQ KMRSFPETNT IQNLVENGQQ  300
QQQQPFRLFE KWLLDEAAVR QGIVELSSLN DDHSFGHDM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08810.12e-89MYB family protein