PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026386270.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 462aa MW: 52048.5 Da PI: 7.1599

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026386270.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.1	3.1e-16	172	217	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+ +W++Ia+++ gR++k+c++rw++ XP_026386270.1 172 RGHWRPAEDSKLKELVALYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 217 899***************************.*********996 PP
2	Myb_DNA-binding	52.3	1.3e-16	224	267	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++++eE+e+l a++ +G++ W+ Iar ++ gRt++ +k++w+ XP_026386270.1 224 RRAFSEEEEEKLMSAHRVYGNK-WAMIARLFP-GRTDNAVKNHWHV 267 678*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MTLQKQFNTA AIIYHHQVYQ DMNNNSNNKY NTPAAATTTE NCNSTSFAPS MGLFAEISSL 60 SINPNGFSSK DSKYICPMNN LEMVSKKTSC MGIPFLTNSN NSLVDQLHLN HNEKCASGGK 120 GSDFSDGFEG NNGMNMDQDN SNSNLINEEN PYDSISVNGK EIDGGQSKLC ARGHWRPAED 180 SKLKELVALY GPQNWNLIAE KLEGRSGKSC RLRWFNQLDP KINRRAFSEE EEEKLMSAHR 240 VYGNKWAMIA RLFPGRTDNA VKNHWHVIMA RKFREQSNVY RRRKLSQTVH RKLDDNSSLT 300 TEQSCFDLNN GSFTSLSPCP FSTSINTEYM FLGSSNNNNK ISPDHQSGFC GADQTTFDPF 360 TGSRNQDLTR FLRQSWERPR DESSFYHHPH HHHQQQQTLT QMMTMQQSNH SHPSIFSNSM 420 TSTSQVSDIE ASASIAENRG GVTHFETTIS PPFIDFLGVG AT

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MTLQKQFNTA AIIYHHQVYQ DMNNNSNNKY NTPAAATTTE NCNSTSFAPS MGLFAEISSL  60
SINPNGFSSK DSKYICPMNN LEMVSKKTSC MGIPFLTNSN NSLVDQLHLN HNEKCASGGK  120
GSDFSDGFEG NNGMNMDQDN SNSNLINEEN PYDSISVNGK EIDGGQSKLC ARGHWRPAED  180
SKLKELVALY GPQNWNLIAE KLEGRSGKSC RLRWFNQLDP KINRRAFSEE EEEKLMSAHR  240
VYGNKWAMIA RLFPGRTDNA VKNHWHVIMA RKFREQSNVY RRRKLSQTVH RKLDDNSSLT  300
TEQSCFDLNN GSFTSLSPCP FSTSINTEYM FLGSSNNNNK ISPDHQSGFC GADQTTFDPF  360
TGSRNQDLTR FLRQSWERPR DESSFYHHPH HHHQQQQTLT QMMTMQQSNH SHPSIFSNSM  420
TSTSQVSDIE ASASIAENRG GVTHFETTIS PPFIDFLGVG AT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	1e-74	MYB family protein