PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026386309.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 393aa MW: 43924 Da PI: 5.8109

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026386309.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53	8.1e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++++G g+W++ + + g+ R++k+c++rw +yl XP_026386309.1 14 KGPWTPEEDQKLLAYIEEYGHGSWRALPPKAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	53.1	7.1e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T +E++ +++++++lG++ W++Ia +++ +Rt++++k++w+++l XP_026386309.1 67 RGKFTLQEEQSIIQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MGRTPCCEKL GLKKGPWTPE EDQKLLAYIE EYGHGSWRAL PPKAGLQRCG KSCRLRWTNY 60 LRPDIKRGKF TLQEEQSIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLTKMG 120 IDPVTHKPKS DALSSVTDGQ SKNSANLSHM AQWESARLEA EARLARESKI IKFNTSMVQQ 180 RPNSGSLAVD SSSSSSAQLL NKMATQPAAQ ALCLDVLRAW QGIKREATSS GSILGLGSNQ 240 DFIESPTSTL SSTDNSNPFP HMGFEETSRG GVEFAEDLNH FGGIMKEECD EDWKGYEKCV 300 DDVVSAVDGQ WTFEPLKIVD GQEPVLHFDD GFTDLLLGHD DQKDQEMNGG SCRDPTNADL 360 ETGKADEFDQ ENKNYWNNVF NLVTTSPSKS HEF

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MGRTPCCEKL GLKKGPWTPE EDQKLLAYIE EYGHGSWRAL PPKAGLQRCG KSCRLRWTNY  60
LRPDIKRGKF TLQEEQSIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLTKMG  120
IDPVTHKPKS DALSSVTDGQ SKNSANLSHM AQWESARLEA EARLARESKI IKFNTSMVQQ  180
RPNSGSLAVD SSSSSSAQLL NKMATQPAAQ ALCLDVLRAW QGIKREATSS GSILGLGSNQ  240
DFIESPTSTL SSTDNSNPFP HMGFEETSRG GVEFAEDLNH FGGIMKEECD EDWKGYEKCV  300
DDVVSAVDGQ WTFEPLKIVD GQEPVLHFDD GFTDLLLGHD DQKDQEMNGG SCRDPTNADL  360
ETGKADEFDQ ENKNYWNNVF NLVTTSPSKS HEF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	1e-101	MYB family protein