PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026386520.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MIKC_MADS
Protein Properties Length: 246aa    MW: 28231.3 Da    PI: 8.8019
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026386520.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF94.64.6e-30959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krienk+nrqvtfskRr g+lKKA+E+SvLCdaeva+i+fs++gkl+eys+
  XP_026386520.1  9 KRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIVFSTKGKLFEYST 59
                    79***********************************************96 PP
2K-box104.31.6e-34831749100
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                     ++++   +++ e+akLk+++e Lqr+qRh++GedLes ++keLq+Le+qL++slk+iR kKn+ll+++i+elq+kek+lqe+n+ L kk++e
  XP_026386520.1  83 TDQESRGNWSLEHAKLKAKVEVLQRNQRHMMGEDLESFNVKELQNLEHQLDTSLKHIRLKKNQLLYASISELQRKEKALQEQNTILGKKIKE 174
                     45666789*********************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MGRGRVQLKR IENKINRQVT FSKRRSGLLK KANEISVLCD AEVALIVFST KGKLFEYSTD  60
ACMDAILERY ERQCCVEEEL VGTDQESRGN WSLEHAKLKA KVEVLQRNQR HMMGEDLESF  120
NVKELQNLEH QLDTSLKHIR LKKNQLLYAS ISELQRKEKA LQEQNTILGK KIKEKEQEMG  180
RLDQQQQSNQ AQNSCSQAQN SAQNSPTFLL SQELPSLTIC TGAYEPDARP IAIQTVIPRW  240
MLGLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69120.11e-90MIKC_MADS family protein