PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026386716.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 305aa MW: 33807.9 Da PI: 9.4207

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026386716.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.1	4.2e-08	6	53	1	44
TSSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.....tWktIartmgkgRtlkqcksrw 44 +g W+ eE++ + +a+++ + W++I+++++ ++ +++k ++ XP_026386716.1 6 KGEWSREEEKAFENAIAKTHNTmdeqqYWEKISSMVQ-SKSMEELKQHY 53 799********************************.********9 PP
2	Myb_DNA-binding	37.7	4.6e-12	145	189	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + + G+g+W++I+r + Rt+ q+ s+ qky XP_026386716.1 145 PWTEEEHRLFLLGLDKCGKGDWRSISRNFVISRTPTQVASHAQKY 189 7***************************99**********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence
MESAVKGEWS REEEKAFENA IAKTHNTMDE QQYWEKISSM VQSKSMEELK QHYGVLVQDI 60 NAIEAGLVSL PRYLGEEEET NMDKQTSSAS DRKKIGSTSG FNTSRSSYFP VGMIGNNDLE 120 GKQQALVRSG SGSKSNQLEK RKGIPWTEEE HRLFLLGLDK CGKGDWRSIS RNFVISRTPT 180 QVASHAQKYF IRLNSMNRDR RRTSIHDITN LNNGVAATPQ GPITGEQTNT TTSSTPNSYI 240 GPSFKHHRSS HSPAMPALAM PRMASAPGQI ISAIGTPVTI PPPGHHYPPP YTHMAYPVVP 300 AAMHQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08520.1	2e-72	MYB family protein