PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026386777.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family YABBY
Protein Properties Length: 208aa    MW: 23294 Da    PI: 8.174
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026386777.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY241.12.4e-74121793170
           YABBY   3 vfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelle.elkveeenlksnvekeesastsv 96 
                     ++  s++vCyv+CnfCntilavsvP ts+f+vvtvrCGhC++llsvn+   sq+l++   ++++  ++ ++ +l +++ nl+  ++++e  ++s 
  XP_026386777.1  12 LDVPSGHVCYVHCNFCNTILAVSVPGTSMFNVVTVRCGHCANLLSVNMGSVSQTLPSPPSINHHQDHNNHQyHLLHQNWNLSHDDTSKEYGMASY 106
                     567899*****************************************************999877666554144555667777788888888888 PP

           YABBY  97 sseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                     + +k s +++e  pr+ p irPPekrqrvPsaynrfikeeiqrikasnPdi+hreafs aaknWahfP+ihfgl
  XP_026386777.1 107 KCNKPSVQNEEPPPRMLP-IRPPEKRQRVPSAYNRFIKEEIQRIKASNPDITHREAFSSAAKNWAHFPHIHFGL 179
                     88888999999999*999.9****************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MSQQSSSSSS SLDVPSGHVC YVHCNFCNTI LAVSVPGTSM FNVVTVRCGH CANLLSVNMG  60
SVSQTLPSPP SINHHQDHNN HQYHLLHQNW NLSHDDTSKE YGMASYKCNK PSVQNEEPPP  120
RMLPIRPPEK RQRVPSAYNR FIKEEIQRIK ASNPDITHRE AFSSAAKNWA HFPHIHFGLT  180
VDSNKQAAKV DDAFIAGDQG TQKTQQFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08465.14e-57YABBY family protein