PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026386782.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 636aa    MW: 68654.2 Da    PI: 4.5347
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026386782.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS454.47.2e-1392696321374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     lv++L++cAeav++++l+ a++l++++  la +++ +m+++a+yf eALa+r+++        l p+e+ +++ se l +   f+e++P+lkf+h
  XP_026386782.1 269 LVHTLMACAEAVQQENLTVASQLVKQIGLLAVSQAGAMRKVATYFGEALARRIYS--------LYPQESLDSSFSEILEM--HFYETCPYLKFAH 353
                     689***************************************************9........55666664444444444..5************ PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +taNqaIlea+eg++rvH+iDf+++qG+QWpaL+qaLa Rp+gpp +R+Tg+g+p+++++++l+++g++La++Ae+++v+fe++ +va++l+dl+
  XP_026386782.1 354 FTANQAILEAFEGKSRVHVIDFSMKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQIAEAIHVEFEYRGFVANSLADLD 448
                     *********************************************************************************************** PP

            GRAS 191 leeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl.eaklpreseer 282
                      ++L+++p   E++aVn+v++lhrll++s+++++    vL  +k+++Pk+v++veqea+hn++ F++rf+e+l+yys+lfdsl   ++++ ++++
  XP_026386782.1 449 ASMLDIRPsdVETVAVNSVFELHRLLNRSGAIDK----VLTSIKEMKPKIVTIVEQEANHNGPVFMDRFTESLHYYSTLFDSLeGCGMSPVDSQD 539
                     ********999***************99999988....*********************************************778999999*** PP

            GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     + +++++lgr+i+nvvaceg +r+erhetl++W+ rle++GF p++l+++a kqa++ll+ ++ +dgyrvee++gsl+lgW++rpL+++SaW+
  XP_026386782.1 540 QLMSEVYLGRQICNVVACEGIDRVERHETLSQWKGRLESSGFAPAHLGSNAFKQASMLLALFAgGDGYRVEENNGSLMLGWHTRPLIATSAWQ 632
                     ********************************************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 636 aa     Download sequence    
MKREYEESSS GGGGGGGLGG GGIGGGSRSG GGLYSMVESS VGGGKSKMMW DEDEQQDAVM  60
DELLAGLGYK VKSSDMAQVA QKLEQLEMVM QVNNNNAKED GLLSHLSSDT VHYNPADLAT  120
WLQSMLTEVN PDNFDPLSNI LPPQQQLFDD PFNNILPQQQ EIPESSIITS LDFSNSRQIY  180
EETTSDYDLR AIPGGAICEP DKKRLKPSSP PLPATTASGS GSASSSSSSA IVTVGGGGGI  240
GIGSSAASLT TESSRPVVLV DSQEAGIRLV HTLMACAEAV QQENLTVASQ LVKQIGLLAV  300
SQAGAMRKVA TYFGEALARR IYSLYPQESL DSSFSEILEM HFYETCPYLK FAHFTANQAI  360
LEAFEGKSRV HVIDFSMKQG MQWPALMQAL ALRPGGPPAF RLTGIGPPQP DNTDALQQVG  420
WKLAQIAEAI HVEFEYRGFV ANSLADLDAS MLDIRPSDVE TVAVNSVFEL HRLLNRSGAI  480
DKVLTSIKEM KPKIVTIVEQ EANHNGPVFM DRFTESLHYY STLFDSLEGC GMSPVDSQDQ  540
LMSEVYLGRQ ICNVVACEGI DRVERHETLS QWKGRLESSG FAPAHLGSNA FKQASMLLAL  600
FAGGDGYRVE ENNGSLMLGW HTRPLIATSA WQLDSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.10.0GRAS family protein