PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026387951.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 643aa    MW: 73201 Da    PI: 5.917
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026387951.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS394.51.1e-1202716412374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     ++lL++cA+avs+gd + a++lL++l +++sp+gd  qR+a+yf+ +L+arla+ +s++y++lp ++ s    ++ l+a++lf  ++P+lk+s++
  XP_026387951.1 271 QTLLIHCAQAVSAGDSRTASELLKQLTQHSSPYGDGSQRVAHYFADGLEARLAGYGSQIYSTLPRKPPS---AADLLKAYQLFMVTFPFLKISYF 362
                     689***************************************************************999...9********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                      aNq+I   +e+++++HiiDf+i +G+QWp+L+q L++R++gpp+lRiTg+g pe+g   +e++eetg+rL+++A+el+vpfe++  +a+++e++
  XP_026387951.1 363 FANQTIGSLAENANTLHIIDFGIIYGFQWPCLMQRLSKRKGGPPKLRITGIGLPEPGfrPAERVEETGRRLRDYAKELNVPFEYHG-IAQKWETI 456
                     ********************************************************9*****************************.7******* PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     +le+L+++++E l+ n++++ ++lldesv l+s+rd+vL+l+++++Pkv+v +  +  +ns+ F+ rf +al ++s+lfd l++ +pre+ er+ 
  XP_026387951.1 457 QLEDLKINTDELLVANCMYHGKNLLDESVILDSPRDAVLELIRKMNPKVFVQAILNGTYNSPFFVSRFRDALFHFSSLFDVLDTIVPRENPERMI 551
                     *********************************************************************************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +Er ++++e+ n++aceg+er+er et+++W++r ++aGF ++pl+++++k+ak      + + + v+e+s +l+lgWk++ L+++S+Wr
  XP_026387951.1 552 IERDFFSKEAFNIIACEGSERIERPETYKQWQSRNMKAGFMQLPLNTDIMKKAKKQAISDYHKDFVVDEDSRWLLLGWKGKILFAISSWR 641
                     *****************************************************87665555466*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 643 aa     Download sequence    
MLMEENNDEN NLVFQEDYLA LQSAEKPFYD ILGQMYPTDC NPEVQIDNFT HYNSSKNAVE  60
TNWIDELGVY ESLFDIGSVP SDYTFQADQT APQLSHDPSN SFNSVVGGLV ESGLGKVQVP  120
DVDSESEPIW QFRKGVEANK FHSDDNNLII NLEHNELIYV ERKKEASEAA DVVVPLDKDV  180
QKISPYRSRG KKNVHREDID LEGKSNKQLA AVQTAMFDMV LISDDEKGKK ADSILRESLK  240
IETRKNLHQN GGRRSHGKKQ TGKKDVVVDL QTLLIHCAQA VSAGDSRTAS ELLKQLTQHS  300
SPYGDGSQRV AHYFADGLEA RLAGYGSQIY STLPRKPPSA ADLLKAYQLF MVTFPFLKIS  360
YFFANQTIGS LAENANTLHI IDFGIIYGFQ WPCLMQRLSK RKGGPPKLRI TGIGLPEPGF  420
RPAERVEETG RRLRDYAKEL NVPFEYHGIA QKWETIQLED LKINTDELLV ANCMYHGKNL  480
LDESVILDSP RDAVLELIRK MNPKVFVQAI LNGTYNSPFF VSRFRDALFH FSSLFDVLDT  540
IVPRENPERM IIERDFFSKE AFNIIACEGS ERIERPETYK QWQSRNMKAG FMQLPLNTDI  600
MKKAKKQAIS DYHKDFVVDE DSRWLLLGWK GKILFAISSW RPM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-172GRAS family protein