PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026387952.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 688aa    MW: 78080.1 Da    PI: 6.042
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026387952.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS389.63.5e-1193156861374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++cA+av++gd   a++lL+++++++sp+gd  qRla++f+ +L+arla+s+s++y++lp ++ s   +++ l+a++lf  + P+ k+s+
  XP_026387952.1 315 LQNLLIRCAQAVAAGDGMTANELLKQIRQHSSPSGDGSQRLAHCFAYGLEARLAGSGSQIYSSLPHKTPS---VADLLKAYQLFMVALPFQKISN 406
                     5789*****************************************************************9...********************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + aN +I   +e+++++HiiDf+i +GlQWp+L++ L++R++gpp+lRiTg++ p++g   +e++eetg+rL+++Aeel+vpfe++  +a+r+e+
  XP_026387952.1 407 IFANLTISHLAENATTLHIIDFGILYGLQWPCLIRHLSKRKGGPPKLRITGIELPRPGfrPAERVEETGHRLRDYAEELNVPFEYHG-IAQRWET 500
                     *********************************************************9*9***************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++le+L+++++E l+ n++++  +lldesv l+s+rd+vL+l+++++P+++v+   +  +ns+ F++rf eal ++s++fd+le+ +pre+ er+
  XP_026387952.1 501 IQLEDLKINKDELLVANCMYRARNLLDESVILDSPRDAVLNLIRKMNPRIFVHGIVNGTYNSPFFVTRFREALFHFSSMFDALETIVPRENPERV 595
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      +Er +lg+e+ n++aceg+er+er et+++W+ r ++aGF ++pl+++++k+ak   r ++ + + ++e+s +l+lgWk+r ++++S+Wr
  XP_026387952.1 596 IIERNFLGKEAFNIIACEGSERVERPETFKQWQLRNRKAGFIQLPLNTDIMKKAKEQARLYYHKDFVIDEDSRWLLLGWKGRIIFAISSWR 686
                     **************************************************************889*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 688 aa     Download sequence    
MDHNHNISSS SSSNCSGIDT SSPNVSQVDE INFPDAVLKY INQMLMEESN EETNFIFQED  60
SLALQFAEKP FYDILGEEYP TSSPDSNPEI QIENFTHYSG SENAVETSWS GEFGAYESFV  120
NNTQSVPSDY TFQAAPPVSY NLPNIMNSAA ERLVESRMGK VQVPDVDSES ESIWQFRKGV  180
EEANKFLPDD NNLINIINLE RNGFFYDERK KEGGEAGDVV VKLDKDVRQI SSYGSRKKKN  240
VHREDIDLEG QSNKQLAAVQ TAMFDMVLIC NGEKGEKANS VLRESLKIET SKNSQQNGGR  300
SRSKKQTGKR DLVDLQNLLI RCAQAVAAGD GMTANELLKQ IRQHSSPSGD GSQRLAHCFA  360
YGLEARLAGS GSQIYSSLPH KTPSVADLLK AYQLFMVALP FQKISNIFAN LTISHLAENA  420
TTLHIIDFGI LYGLQWPCLI RHLSKRKGGP PKLRITGIEL PRPGFRPAER VEETGHRLRD  480
YAEELNVPFE YHGIAQRWET IQLEDLKINK DELLVANCMY RARNLLDESV ILDSPRDAVL  540
NLIRKMNPRI FVHGIVNGTY NSPFFVTRFR EALFHFSSMF DALETIVPRE NPERVIIERN  600
FLGKEAFNII ACEGSERVER PETFKQWQLR NRKAGFIQLP LNTDIMKKAK EQARLYYHKD  660
FVIDEDSRWL LLGWKGRIIF AISSWRPL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein