PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026388049.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 254aa    MW: 29320.7 Da    PI: 4.7292
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026388049.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B336.87e-128100498
                     E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     + +++++ ++  +++p +f++e+g +   s   ++  +sg +W v+++ + +s++  ++++kG +e  ++  L +g f+v+k++g s+f  +v++
  XP_026388049.1   8 QIINNYHVQQEEIRIPQEFVTEYGDD--LSDHAVFIVPSGIEWFVEIKRDSNSDGrcVYFKKGLNELFESYSLTSGTFLVLKYEGISQF--KVRI 98 
                     567899999999***********988..7779***************7755555469**************************999999..8988 PP

                     E- CS
              B3  97 fr 98 
                     ++
  XP_026388049.1  99 CQ 100
                     86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MGGPRFIQII NNYHVQQEEI RIPQEFVTEY GDDLSDHAVF IVPSGIEWFV EIKRDSNSDG  60
RCVYFKKGLN ELFESYSLTS GTFLVLKYEG ISQFKVRICQ LSGKEVDYSS FHNNDTDVYY  120
IEASDEDGDN DDSEDDSNDE EREEFRDDPV RKKNRSITHG SLRTQERAIE IERGFKSSRN  180
NPFFTIGLQP SYVSHKFLPI PANFEGKEEL RKLENIRLDV VPNGGSWIVF LITMGRGQGI  240
RFIKVFLGFL KTTI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.18e-16B3 family protein