PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026388129.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 316aa MW: 35629.7 Da PI: 8.5458

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026388129.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.8	1e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l++++k +G g+W++ ++ g+ R++k+c++rw +yl XP_026388129.1 14 KGAWTKEEDQRLINYIKTHGEGCWRSLPKSAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	59.7	6.4e-19	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T+eEdel+++++ +lG++ W++Ia +++ gRt++++k++w+++ XP_026388129.1 67 RGNFTEEEDELIIKLHSLLGNK-WSLIAGRLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MGRSPCCEKA HTNKGAWTKE EDQRLINYIK THGEGCWRSL PKSAGLLRCG KSCRLRWINY 60 LRPDLKRGNF TEEEDELIIK LHSLLGNKWS LIAGRLPGRT DNEIKNYWNT HIKRKLLSRG 120 LDPQTHRPIS TAGGTITNNY NISSSGSCMD QPEIITTSNG TSSMIKIEST TSNNLIHNGN 180 YYSSSIKEAT TNSNSTGTTV EEDNGHQTPK KEFNDDDDDE GLNLDLSISL PTHHRKLSSS 240 TNSAESKPFS EIFSYHKQLG VSSNHHQRQG GVCLCYKLGF QRNETCNCSS SNRHQTLNNP 300 MMISSDLFRY YRPLNP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22640.1	5e-93	MYB family protein