PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026388268.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

WRKY

Protein Properties

Length: 253aa MW: 29465.8 Da PI: 8.7037

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026388268.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.9	7.4e-32	176	234	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk++++prsYYrCt +C+vkk+ver aedp++v++tYeg+H h+ XP_026388268.1 176 LDDGYKWRKYGQKVVKDTQHPRSYYRCTVDTCRVKKRVERLAEDPRMVITTYEGRHGHT 234 59*******************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence
MTYSSSQLML NHGLLEEHHH NHHQEINIPL NDHMGLFTQS NSNFPLPNNW TFPPYGYHDN 60 PVFHHSTTSK IRRDAVSFHH LGGGGADHEF DNYDPQPPSS VQRFSSSTNL WPWGDVDNDV 120 CLGSSNVKQQ KCFGENNNNH HVLGITAMKM MKKVKGRRKI REPRFCFKTK SEVDVLDDGY 180 KWRKYGQKVV KDTQHPRSYY RCTVDTCRVK KRVERLAEDP RMVITTYEGR HGHTPSQDQE 240 NSQAQLQTNN FFW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39410.1	2e-47	WRKY family protein