PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026388304.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 422aa MW: 47095 Da PI: 8.632

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026388304.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.5	3.2e-18	34	79	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l ++v+q+G+ +W++Ia++++ gR++k+c++rw++ XP_026388304.1 34 RGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQ-GRSGKSCRLRWFNQ 79 899***************************.*********996 PP
2	Myb_DNA-binding	49.2	1.3e-15	86	129	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r +++ eE+++l+ a++ +G++ W++I+r ++ gRt++ +k++w+ XP_026388304.1 86 RRPFSVEEEDRLLGAHRVHGNK-WALISRLFP-GRTDNAVKNHWHV 129 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MEADTVSSSV GGSSSTSRGN NNNLDDLTNK SCPRGHWRPA EDEKLRQLVE QYGPQNWNSI 60 AEKLQGRSGK SCRLRWFNQL DPRINRRPFS VEEEDRLLGA HRVHGNKWAL ISRLFPGRTD 120 NAVKNHWHVI MARKQRERSK LLYGSKGSSS SSSINYYDKS NGFVGIYSSL RSSHNNDLYN 180 CSSEFQYENS CSSRGINIEF RERHKDIDSS DEHEALEIFW TGTSLSDKSV QPSWVFPAGP 240 TGTVYSQQKH LMNGLGNGGG SSTLVVRDIF RSSTSSNACR IMERPSSLHG FNGDRSSALH 300 HYHHQCYNLS KYSSSSMYGP GYRSLGAAIT EPGNFVRMSH PAGELPTSNL GDGTGLRFGS 360 DKKLTNKQDI VHLGHTRSYE CPRLSMSNQL QEQLGDPHDQ SAVEQKEVPA FIDFLGVGIS 420 LP

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MEADTVSSSV GGSSSTSRGN NNNLDDLTNK SCPRGHWRPA EDEKLRQLVE QYGPQNWNSI  60
AEKLQGRSGK SCRLRWFNQL DPRINRRPFS VEEEDRLLGA HRVHGNKWAL ISRLFPGRTD  120
NAVKNHWHVI MARKQRERSK LLYGSKGSSS SSSINYYDKS NGFVGIYSSL RSSHNNDLYN  180
CSSEFQYENS CSSRGINIEF RERHKDIDSS DEHEALEIFW TGTSLSDKSV QPSWVFPAGP  240
TGTVYSQQKH LMNGLGNGGG SSTLVVRDIF RSSTSSNACR IMERPSSLHG FNGDRSSALH  300
HYHHQCYNLS KYSSSSMYGP GYRSLGAAIT EPGNFVRMSH PAGELPTSNL GDGTGLRFGS  360
DKKLTNKQDI VHLGHTRSYE CPRLSMSNQL QEQLGDPHDQ SAVEQKEVPA FIDFLGVGIS  420
LP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17950.1	6e-63	MYB family protein