PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026388332.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 478aa    MW: 55255 Da    PI: 9.5454
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026388332.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.69.6e-18781641098
                     HHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SSSEE..EEEEE- CS
              B3  10 vlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.grsefelvvkvfr 98 
                     +++  +l +p k ++++   +++ e s  +tl+ +sgr+W+v+l ++ +s++ +l+kGW+ Fv++++Lk++D+++Fk++ g+s f   v +f+
  XP_026388332.1  78 NFR-YQLKFPEKLVKKClrnELS-EIS-VVTLKGPSGRTWTVQL-MKYGSEELYLKKGWEVFVQEHNLKQNDVLLFKYNlGTSVF--EVLIFD 164
                     333.4589999999999875444.344.79999***********.6777788*************************99565888..777776 PP
2B345.31.6e-14371461193
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                     f+  +++s+ ++   +++p + a++h ++  ++k + le  +g++W+ k+ ++k +    + ++GW +Fv++n +k+gD ++F+ ++ s ++l+
  XP_026388332.1 371 FVVSMKRSHISAIYYMTIPVDAARKHISP--GTKRIYLEM-NGKTWKAKYVWKKEGVNsGITGRGWTDFVQENTIKVGDACLFEITSPSATTLK 461
                     667788888889999***********644..566788776.9********9854443347889*********************7665666555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 478 aa     Download sequence    
MKLNQRELQL LPASGSSHRA NAQGMGTGNT SFSRLQLEVF KGDRTKMGGK CEDCEKWEEE  60
MYWSKFKVVH FFSVLTNNFR YQLKFPEKLV KKCLRNELSE ISVVTLKGPS GRTWTVQLMK  120
YGSEELYLKK GWEVFVQEHN LKQNDVLLFK YNLGTSVFEV LIFDEANFCE KERSHSNSNN  180
EGSHRSTNKE WLNEGRKRVE REPWIDVKGC HKSKGLNEGR KRVEREPSFE IIETKTVRYK  240
KKAMTISDND EEDEQVYGRV IVHPRLERQS SFEIIEHKKV HYKKKAIAIS DDEEEEEVYG  300
RVIVHPRSSN PLPGSKGKAL VPVKPEEVSE DDEVTPVNPL ALVLKRKSGK EEHEVFEQAV  360
REGKRRRAPH FVVSMKRSHI SAIYYMTIPV DAARKHISPG TKRIYLEMNG KTWKAKYVWK  420
KEGVNSGITG RGWTDFVQEN TIKVGDACLF EITSPSATTL KKSVRFKVSI FETDEDLL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1345367KRKSGKEEHEVFEQAVREGKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.14e-28B3 family protein