PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026388443.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HD-ZIP
Protein Properties Length: 300aa    MW: 33375.4 Da    PI: 7.4714
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026388443.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.79.8e-19146200256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk+ ++tkeq   Le+ F+++++++ ++++ LAk+l+L  rqV vWFqNrRa+ k
  XP_026388443.1 146 RKKLRLTKEQSSLLEDNFKEHSTLNPKQKQALAKQLNLRPRQVEVWFQNRRARTK 200
                     788899***********************************************98 PP
2HD-ZIP_I/II121.73.7e-39146234189
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 
                     +kk+rl+keq++lLE++F+e+++L+p++K++la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l+een++L+ke +e ++
  XP_026388443.1 146 RKKLRLTKEQSSLLEDNFKEHSTLNPKQKQALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTEENRKLHKELQEFKA 234
                     69***********************************************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MGFQVIDGDD NLCNIGLGLG LNTSFDQSES KSHDHADDQK ELIRRFKLEP ILTLGFSSSD  60
NNNNHLVEAV DRRNYTPSLS SPNSALSNSF SNTNGSIKRS SPSSVIKREK ELLLVVGYHE  120
EMEVEKVVNS SSRVVASDED DEGSARKKLR LTKEQSSLLE DNFKEHSTLN PKQKQALAKQ  180
LNLRPRQVEV WFQNRRARTK LKQTEVDCEF LKKCCETLTE ENRKLHKELQ EFKASKLSQP  240
QSMYMQLPAA TLTICPSCEK LGGGGGAGDG TDGPAKNSLT MAPGKPQFYN PFQQHPSAAC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1195203RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37790.14e-77HD-ZIP family protein