PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026388922.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 622aa    MW: 71284.4 Da    PI: 9.3789
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026388922.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.61.6e-11911641897
                     --HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3  18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                     +p +f+e+++g+   + + +l+++ g  W+vk++ +  +g+  ++kGW++Fv+++ L+  Dfv+ k++g+s+f   vk++
  XP_026388922.1  91 IPVNFIEKFNGV--IPYDSMLRSPLGC-WNVKVR-EEEDGSLSFRKGWSDFVESHYLRHEDFVTVKYIGNSQF--SVKLY 164
                     999999999888..7788999999986.*****3.666677******************************99..77765 PP
2B340.74.4e-132743501292
                     HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
              B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                     k+ +l +p k ++++g     s  + l+  +g  W+v+l  +++ g++++ kGWkeF++ n L++g ++ ++++g+s+f+ 
  XP_026388922.1 274 KRYQLEIPQKVVRKIGRT--LSDIIALKRADGILWNVEL--KRSEGKVWFDKGWKEFAEHNSLRDGHVLGISYNGNSRFSV 350
                     667899*********855..8889***************..*********************************9999943 PP
3B342.51.2e-13520614199
                     EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                     ff v ++  +l+ g l +p+ fa+++  +   +  k ++++++++++W++ +    +++++ l++GW +  +  gL e D++vF+l ++++ e++
  XP_026388922.1 520 FFAVCMRDTYLTYGYLHVPNYFAKKYlpK---NI-KNIIVRSSDNKVWTIGY--IASGKATKLSTGWTSLRRHLGLTEDDVCVFELLKEKDPEMR 608
                     67777888899999************432...33.48***************..78888889************************999999999 PP

                     EEEE-S CS
              B3  94 vkvfrk 99 
                     v vfr+
  XP_026388922.1 609 VFVFRE 614
                     999985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 622 aa     Download sequence    
MGDIKIKYQM AHLTYKIHLS YMNDINKNMG SLQSYSSPSF FKVMAGDFAK KLVSFSLIFC  60
SSMLFIFPLI IDFFGYGLVL FLFIFSIVQK IPVNFIEKFN GVIPYDSMLR SPLGCWNVKV  120
REEEDGSLSF RKGWSDFVES HYLRHEDFVT VKYIGNSQFS VKLYGKNGCE KVLPSSIGSN  180
GAKSIPSRKR KEFGETCKGT FSNYGSEFDH YQYHAGDIGR DSSLCSDKRD CGLFRCEALK  240
KKAIFSKRRT GVDQAECSGR RKKPYFLAIW TENKRYQLEI PQKVVRKIGR TLSDIIALKR  300
ADGILWNVEL KRSEGKVWFD KGWKEFAEHN SLRDGHVLGI SYNGNSRFSV CITNVMDHLD  360
DSRNQGESNP KKRCPLSKRV ADDEDVLLLD SPAPSRTHVE SKTNEERRQS PAPSRTHVES  420
KTNEERRQLS CPPGIDIPMH LNKNEGTKYL VSDETKSAYL EGERTPSGER LPVVKGEESE  480
DTSDSADASK LFLISSRRDK GIERVAEVTR LFERQTQFPF FAVCMRDTYL TYGYLHVPNY  540
FAKKYLPKNI KNIIVRSSDN KVWTIGYIAS GKATKLSTGW TSLRRHLGLT EDDVCVFELL  600
KEKDPEMRVF VFREIDNVLT RI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1247263KRRTGVDQAECSGRRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.16e-27B3 family protein