PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026388923.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 585aa    MW: 67017.2 Da    PI: 9.5108
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026388923.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.55e-1340127197
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffkv+  +  ++++ l +p +f+e+++g+   + + +l+++ g  W+vk++ +  +g+  ++kGW++Fv+++ L+  Dfv+ k++g+s+f   vk
  XP_026388923.1  40 FFKVM--AGDFAKK-LKIPVNFIEKFNGV--IPYDSMLRSPLGC-WNVKVR-EEEDGSLSFRKGWSDFVESHYLRHEDFVTVKYIGNSQF--SVK 125
                     77777..6666666.9**********988..78899*9**9996.*****3.666677******************************99..777 PP

                     EE CS
              B3  96 vf 97 
                     ++
  XP_026388923.1 126 LY 127
                     65 PP
2B340.84e-132373131292
                     HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
              B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                     k+ +l +p k ++++g     s  + l+  +g  W+v+l  +++ g++++ kGWkeF++ n L++g ++ ++++g+s+f+ 
  XP_026388923.1 237 KRYQLEIPQKVVRKIGRT--LSDIIALKRADGILWNVEL--KRSEGKVWFDKGWKEFAEHNSLRDGHVLGISYNGNSRFSV 313
                     667899*********855..8889***************..*********************************9999943 PP
3B342.61.1e-13483577199
                     EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                     ff v ++  +l+ g l +p+ fa+++  +   +  k ++++++++++W++ +    +++++ l++GW +  +  gL e D++vF+l ++++ e++
  XP_026388923.1 483 FFAVCMRDTYLTYGYLHVPNYFAKKYlpK---NI-KNIIVRSSDNKVWTIGY--IASGKATKLSTGWTSLRRHLGLTEDDVCVFELLKEKDPEMR 571
                     67777888899999************432...33.48***************..78888889************************999999999 PP

                     EEEE-S CS
              B3  94 vkvfrk 99 
                     v vfr+
  XP_026388923.1 572 VFVFRE 577
                     999985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 585 aa     Download sequence    
MGDIKIKYQM AHLTYKIHLS YMNDINKNMG SLQSYSSPSF FKVMAGDFAK KLKIPVNFIE  60
KFNGVIPYDS MLRSPLGCWN VKVREEEDGS LSFRKGWSDF VESHYLRHED FVTVKYIGNS  120
QFSVKLYGKN GCEKVLPSSI GSNGAKSIPS RKRKEFGETC KGTFSNYGSE FDHYQYHAGD  180
IGRDSSLCSD KRDCGLFRCE ALKKKAIFSK RRTGVDQAEC SGRRKKPYFL AIWTENKRYQ  240
LEIPQKVVRK IGRTLSDIIA LKRADGILWN VELKRSEGKV WFDKGWKEFA EHNSLRDGHV  300
LGISYNGNSR FSVCITNVMD HLDDSRNQGE SNPKKRCPLS KRVADDEDVL LLDSPAPSRT  360
HVESKTNEER RQSPAPSRTH VESKTNEERR QLSCPPGIDI PMHLNKNEGT KYLVSDETKS  420
AYLEGERTPS GERLPVVKGE ESEDTSDSAD ASKLFLISSR RDKGIERVAE VTRLFERQTQ  480
FPFFAVCMRD TYLTYGYLHV PNYFAKKYLP KNIKNIIVRS SDNKVWTIGY IASGKATKLS  540
TGWTSLRRHL GLTEDDVCVF ELLKEKDPEM RVFVFREIDN VLTRI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1210226KRRTGVDQAECSGRRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-25B3 family protein