PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026388989.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family Nin-like
Protein Properties Length: 352aa    MW: 40182.7 Da    PI: 4.4331
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026388989.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK711.6e-22257304249
          RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRki 49 
                     +  ++l dl + F+ pi+ AAkeL++c+TvLK++CRq+G+kRWP+R  
  XP_026388989.1 257 TRALTLTDLTRRFHVPINTAAKELEICTTVLKKKCRQFGVKRWPSRAC 304
                     5789******************************************75 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MPSCSNVEED LLAMDDVARY FPESSPTLNF DELLNGNSQH DDEDLFDWDT ENPVMNDDDY  60
NFNNSPNVDF TDGVEGEIPE YVGDIGNEVG TNFVVPFSVW PPVRAPFNCS YCHLLREIIH  120
ENGENSMRLE IHGRIGFISH AIHEMRTNVI DGPPIVNYEM FDFTMQSMES VKQFIVQYCQ  180
SRTQEGYVLL PDPLSVYYDA LCYGLNCFNN VDPDELNPPS DNTEARHIGA EEENRTPANT  240
NDTRTPRPGL ASQRQRTRAL TLTDLTRRFH VPINTAAKEL EICTTVLKKK CRQFGVKRWP  300
SRACEQVISK TKKLSILETS LREGNGSQNA SREIETLRKQ LEDIYACRDV HD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.16e-11Nin-like family protein