PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026389305.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 208aa    MW: 23824.2 Da    PI: 7.7691
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026389305.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR182.38.3e-2650137289
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                     fY++YA++vGF +r+ + ++s+ +g+i +r++ C+keg+ +++k k+   r++r++ r gCka++ vk ek++kw+vt+++++HnH+l
  XP_026389305.1  50 FYDDYATQVGFIMRVMACRRSEVDGRILSRRLGCNKEGRCNSTKGKHGPLRKPRTSAREGCKAMILVKIEKSAKWVVTRFVKDHNHPL 137
                     9*****************************************99999***************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MDVKTRIDDG VGELGCSIDE VEFVDCGDNV ALLEPYEGME FESEDAATAF YDDYATQVGF  60
IMRVMACRRS EVDGRILSRR LGCNKEGRCN STKGKHGPLR KPRTSAREGC KAMILVKIEK  120
SAKWVVTRFV KDHNHPLGVS TRERRHKMDE KDKRIQELTA ELRRKKRLCA AYREQLNTLM  180
KDVEEHNELL SAKVQVIVNK MKDVESED
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1162168LRRKKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.17e-76FAR1 family protein