PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026389308.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 170aa    MW: 19738.8 Da    PI: 10.0465
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026389308.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1835e-261299289
            FAR1  2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89
                    fY++YA++vGF +r+ + ++s+ +g+i +r++ C+keg+ +++k k+   r++r++ r gCka++ vk ek++kw+vt+++++HnH+l
  XP_026389308.1 12 FYDDYATQVGFIMRVMACRRSEVDGRILSRRLGCNKEGRCNSTKGKHGPLRKPRTSAREGCKAMILVKIEKSAKWVVTRFVKDHNHPL 99
                    9*****************************************99999***************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MEFESEDAAT AFYDDYATQV GFIMRVMACR RSEVDGRILS RRLGCNKEGR CNSTKGKHGP  60
LRKPRTSARE GCKAMILVKI EKSAKWVVTR FVKDHNHPLG VSTRERRHKM DEKDKRIQEL  120
TAELRRKKRL CAAYREQLNT LMKDVEEHNE LLSAKVQVIV NKMKDVESED
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1124130LRRKKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.12e-73FAR1 family protein