PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026389532.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 872aa    MW: 94024.8 Da    PI: 6.2834
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026389532.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3312.2e-1015108711374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                     lv++L+++Ae v+sg+  laq +Larl+++ + p g+p+ R+a+yf+eAL + l+       ++ p ++ s+ +++ ++ a+k fse+sP+l+fs
  XP_026389532.1 510 LVDQLFKAAELVESGNSVLAQGILARLNHQlSHPIGKPLYRAAFYFKEALLQLLST-----PNSPPLKNFSPIDVVMKIGAYKSFSEISPLLQFS 599
                     6899************************9979999*****************9998.....6677888888889********************* PP

            GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrle 187
                     ++t Nqa+le+++g +++HiiDfdi+ G+QW++++q++a +++g+psl+i +++s +s+  +k el  t+e L++fA+ lg++fe++++   +l+
  XP_026389532.1 600 NFTLNQALLESLDGFDHIHIIDFDIGIGGQWASFMQEIAMKNGGAPSLKISAFASFSSNdhHKLELALTKEHLTHFANDLGISFEIDIV---DLD 691
                     ******************************************************98887789999***********************7...555 PP

            GRAS 188 dlel..eeL..rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                     +l++  ++L  +v+++E++aVnl +    +       +s ++++L+lvk+lsPk+vv v++ +d+++ +F ++ l+al+ ys l+dsl+a+  ++
  XP_026389532.1 692 TLDPssWSLpiHVSEKETVAVNLPVGSSCIN------PSSIPALLRLVKQLSPKIVVSVDRGCDRSDLPFSQHCLQALQAYSILLDSLDAT-NSN 779
                     554411444448999**********888886......444567*********************************************999.799 PP

            GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     se+ +k+Er+l++++i++ v +++      he+l  Wr  + +aGF+pv++s+++++qa++ll++ +++g++ve++++slvl+W++r+Lv +SaW
  XP_026389532.1 780 SETINKIERFLVQPRIESTVFQRHLC----HEKLPPWRTLFASAGFSPVTFSNFTETQAECLLKRLQGRGFHVEKRQASLVLCWQRRELVLASAW 870
                     9*******************998888....***************************************************************** PP

            GRAS 374 r 374
                     r
  XP_026389532.1 871 R 871
                     8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 872 aa     Download sequence    
MRGIPFNNLE GSNKFGVISS TTAAAEAAEI SSLTQFYWKT QEEEIIRAGN SCFFGTEVEP  60
TSVLDTRRSP GSSTSTLSAS SFGGGGGGGG GIVLVGGGFG GGSTDRASVA AVSDNNPLQK  120
WPTTTTITNQ EENSTPAATP DVSASSGSSS GGGGGSRKDE WGSELQPISS NHQEIVSSGG  180
SGGGINTIIS GGEKYGGLAV DDWDNMLETD ASPSLLRWII DDAEDPTSSA ALLQGGGVAG  240
VSHLHDASSD HHHVGTYNAG FGMVDPTAAA AAAFGFESIG GGIGGYINLL GGGGGGGGGV  300
PGSGFSSGRM NFNNSIQQQQ QQNPSANFNT TKMASSPCFN NTGNTTNPFT VAPNHNLLPP  360
PGAFYHNNNN QQFEDEKPQL YNPQIMMMNQ NQQHLKNSST PPFFVPLPSY QQDQSGCFPP  420
PKRHQGMGGN PSNCHPMQKN SSFMDSGQEH LFRKQQHQQQ QNGFPHQLHL LPNHLQQRPP  480
PVMLTKPKLD EHQNQQQNRQ QQQQQQQQAL VDQLFKAAEL VESGNSVLAQ GILARLNHQL  540
SHPIGKPLYR AAFYFKEALL QLLSTPNSPP LKNFSPIDVV MKIGAYKSFS EISPLLQFSN  600
FTLNQALLES LDGFDHIHII DFDIGIGGQW ASFMQEIAMK NGGAPSLKIS AFASFSSNDH  660
HKLELALTKE HLTHFANDLG ISFEIDIVDL DTLDPSSWSL PIHVSEKETV AVNLPVGSSC  720
INPSSIPALL RLVKQLSPKI VVSVDRGCDR SDLPFSQHCL QALQAYSILL DSLDATNSNS  780
ETINKIERFL VQPRIESTVF QRHLCHEKLP PWRTLFASAG FSPVTFSNFT ETQAECLLKR  840
LQGRGFHVEK RQASLVLCWQ RRELVLASAW RC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-112GRAS family protein