PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026389551.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MIKC_MADS
Protein Properties Length: 220aa    MW: 25527 Da    PI: 9.0981
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026389551.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF98.62.6e-31958150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    krien++nrqvtf+kRrng+lKKA+ELS+LCdaeva+i+fss+g+lyey+
  XP_026389551.1  9 KRIENTTNRQVTFCKRRNGLLKKAYELSILCDAEVALIVFSSRGRLYEYA 58
                    79***********************************************8 PP
2K-box112.44.5e-37791745100
           K-box   5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                     +++s  ea+a ++qqe++kLk++i+ Lq+++Rhl+Ge+++sL++keL+qLe++Le++l++iRskKnel++++ie++q+ke elq+en  Lr+k+ 
  XP_026389551.1  79 NTTSIIEANAHYYQQEATKLKQQIQILQNTNRHLMGESISSLTVKELKQLENRLERGLTRIRSKKNELMFAEIEYMQRKEVELQKENVFLRAKVT 173
                     455578999***********************************************************************************997 PP

           K-box 100 e 100
                     e
  XP_026389551.1 174 E 174
                     5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MGRGKIEIKR IENTTNRQVT FCKRRNGLLK KAYELSILCD AEVALIVFSS RGRLYEYANS  60
SIKSTIERYK KVCSAECSNT TSIIEANAHY YQQEATKLKQ QIQILQNTNR HLMGESISSL  120
TVKELKQLEN RLERGLTRIR SKKNELMFAE IEYMQRKEVE LQKENVFLRA KVTEDEENEQ  180
TNLRPVPDQL DHHQVNFFQV NMLNGGPSSY SDHQTALHLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18960.17e-94MIKC_MADS family protein