PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026389652.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HB-other
Protein Properties Length: 110aa    MW: 12180.7 Da    PI: 5.1972
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026389652.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox35.81.3e-11355656
                    S--HHHHHHHHHHHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  6 tftkeqleeLeelFek..nrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    +++++qle+Le++++     +ps   r++L + lgL+++qV++WF  r  k+k
  XP_026389652.1  3 SPSPDQLEILEDAYAFsgYLTPSLGIRKRLENDLGLSDAQVRYWFDDRAKKDK 55
                    589**********9973355678889*******************99877776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 110 aa     Download sequence    
MESPSPDQLE ILEDAYAFSG YLTPSLGIRK RLENDLGLSD AQVRYWFDDR AKKDKDSTAN  60
PFSGSVKVLP SVSRWYGSVC TTSRPEEAAP NLEVSKKQAG KQLGELIQKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28420.12e-06HB-other family protein