PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026389693.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 255aa MW: 28372.7 Da PI: 6.957

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026389693.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.3	1.1e-10	50	93	3	44
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 W+ e d+ + +a + ++ g +W++Ia ++ g+tl+++ks++ XP_026389693.1 50 TWSREQDKAFENALAIHPEGtenRWEKIAVEVT-GKTLEDVKSHY 93 7*****************************9.********9 PP
2	Myb_DNA-binding	45.2	2.1e-14	158	202	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + +++G+g+W++I+r +Rt+ q+ s+ qky XP_026389693.1 158 AWTEEEHRLFLLGLEKYGKGDWRSISRNYVVTRTPTQVASHAQKY 202 6*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MFLSGFERPS SEFFKVSIYR KPNWIILCSC NILVVSLMQM TADETSESST WSREQDKAFE 60 NALAIHPEGT ENRWEKIAVE VTGKTLEDVK SHYDILVEDI SGIEAGLVPV PCYVSSPEGS 120 AEHVGEGGAS RKDENSQGNS NHKGKASRLD QERRKGIAWT EEEHRLFLLG LEKYGKGDWR 180 SISRNYVVTR TPTQVASHAQ KYFIRLSNSM NKDRRRSSIH DITGVGDAEN ISTTSRGPIT 240 GQANGHFAAG PRAVL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08520.1	1e-91	MYB family protein