PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026389695.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 218aa MW: 24065.5 Da PI: 6.5188

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026389695.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.7	8.5e-11	13	56	3	44
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 W+ e d+ + +a + ++ g +W++Ia ++ g+tl+++ks++ XP_026389695.1 13 TWSREQDKAFENALAIHPEGtenRWEKIAVEVT-GKTLEDVKSHY 56 7*****************************9.********9 PP
2	Myb_DNA-binding	45.6	1.6e-14	121	165	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + +++G+g+W++I+r +Rt+ q+ s+ qky XP_026389695.1 121 AWTEEEHRLFLLGLEKYGKGDWRSISRNYVVTRTPTQVASHAQKY 165 6*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence
MQMTADETSE SSTWSREQDK AFENALAIHP EGTENRWEKI AVEVTGKTLE DVKSHYDILV 60 EDISGIEAGL VPVPCYVSSP EGSAEHVGEG GASRKDENSQ GNSNHKGKAS RLDQERRKGI 120 AWTEEEHRLF LLGLEKYGKG DWRSISRNYV VTRTPTQVAS HAQKYFIRLS NSMNKDRRRS 180 SIHDITGVGD AENISTTSRG PITGQANGHF AAGPRAVL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08520.1	2e-92	MYB family protein