PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026389778.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 537aa    MW: 59212.7 Da    PI: 4.831
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026389778.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS416.52.4e-1271655321374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdg..dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                     lv+lL++cAeav++g+ +la al+++++ + +       + ++a yf  ALa+r+++  ++  + lp++e++    +e+ + ++ f+e++P+lkf
  XP_026389778.1 165 LVHLLMTCAEAVQHGHISLAAALIEEMRYTLTRVNtlCGIGKVAGYFIDALARRVYS--PSQESFLPATEST----QENEFLYHQFYEACPFLKF 253
                     68**************************99555551369******************..5555566777765....666678899********** PP

            GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrled 188
                     +h+taNqaIlea++g++ vH+iDf++ +GlQWpaL+qaLa Rp+gpp lR+Tg+g+p+++ +++l+e+g r+a++A +++v+f f+ ++a+rl+d
  XP_026389778.1 254 AHFTANQAILEAFQGHDYVHVIDFNLVHGLQWPALIQALALRPGGPPVLRLTGIGPPSTDGSDSLREIGLRIAEVAWSVNVKFTFRGVAASRLDD 348
                     *********************************************************************************************** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsles.erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseer 282
                     +++++L+vkp Ea+aVn+++qlhrll  + +  s ++d+vL+ ++sl+Pk+v+vveqeadhn++ Fl rf+eal+yys++fdsl+a      +++
  XP_026389778.1 349 VKPWMLQVKPFEAVAVNSIMQLHRLLGTDSTRGSpPIDTVLSWIRSLNPKIVTVVEQEADHNQPGFLSRFTEALYYYSTIFDSLDAC---GLHQE 440
                     **************************9998888889************************************************887...34555 PP

            GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +   ++++++ei+nv++ceg +r+erhe l kWr+rl +aGF+p++l+++a kqa++ll  ++ +gy+vee +g l+l W++rpL+++SaW+
  XP_026389778.1 441 KAFAEMYIQKEICNVLSCEGISRVERHEPLIKWRNRLVDAGFGPLHLGSNALKQARMLLTLFSAEGYSVEETEGFLTLNWQSRPLIAASAWQ 532
                     5566677************************************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 537 aa     Download sequence    
MGPYDLGISV GSSNNNSGSN CFHNEKLVTP DIDGLLASDA VLYSMLNELN QSLPNYSSAS  60
HHHHHLSNLS ADLELIDSLI PAPESLDPTA GNIVWSDQNG INQQAQVNQA SPPAQQHQMT  120
TTSVVSPKNE IEMSYESSEN VQELGLVSAS SPAEATEEED PSIRLVHLLM TCAEAVQHGH  180
ISLAAALIEE MRYTLTRVNT LCGIGKVAGY FIDALARRVY SPSQESFLPA TESTQENEFL  240
YHQFYEACPF LKFAHFTANQ AILEAFQGHD YVHVIDFNLV HGLQWPALIQ ALALRPGGPP  300
VLRLTGIGPP STDGSDSLRE IGLRIAEVAW SVNVKFTFRG VAASRLDDVK PWMLQVKPFE  360
AVAVNSIMQL HRLLGTDSTR GSPPIDTVLS WIRSLNPKIV TVVEQEADHN QPGFLSRFTE  420
ALYYYSTIFD SLDACGLHQE KAFAEMYIQK EICNVLSCEG ISRVERHEPL IKWRNRLVDA  480
GFGPLHLGSN ALKQARMLLT LFSAEGYSVE ETEGFLTLNW QSRPLIAASA WQPFASD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.11e-137GRAS family protein