PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026389917.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Nin-like

Protein Properties

Length: 985aa MW: 107755 Da PI: 4.8527

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026389917.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.7	2.8e-29	605	655	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isl++l++yFs+++kdAAk +gvc+T+LKriCRq+GI+RWP+Rki+++ XP_026389917.1 605 EKNISLSVLQQYFSGSLKDAAKAIGVCPTTLKRICRQHGISRWPSRKINKV 655 89***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 985 aa Download sequence
MEFNYPVRDK GVNYWASSSS SSSAPVHIDG GFLDSSNQIS MDSFNNFSGL MNFDYSGGDG 60 EFCSGGSPDC FSVPSISDGF VTFSPLNFTS QSSCVFPMID GDGDGGGGCS PDAAAFSDKL 120 VFQQVDDTTQ VDLPLNESTD VNDSDGGQLS NNELSPVRMS DMMVDVVIPR PLSWTFSERM 180 LKALGMFKDS SGGGILAQVW VPVTQGNEIV LSTCEQPYLL DQMLEGYREV SRGFTFPAKE 240 KPGCYPGLPG RVFSSKLPEW TSNVMYYNMV EYLRVKYAID HEVRGSLALP IINPEDQSCC 300 AVLELVTVKE KSNFDPEIEN VCRALQSVNL KTIAPPRVHP QCFSMNQRAA LAEIVDVLRA 360 ACHAHRLPLA LTWIPCSYPD VAKNEHIEMS LRENKNSSSE KSVLCVEDTA CYVNNTDMQG 420 FVRACTEQFL EKGQGIVGRA LQSNHPFFSP DVKEYAIRDY PLVHHSRKYG LNAAVAIRLR 480 STYTGDDDYI LEFFLPINCT GSSEQQLLLN SLSNTMQRVC RSLRTVSNAE LVGVDESKLG 540 IQKGAPINLP SSVLSGNPNC RSDSAERLPL HLSDAMSDGT EADRSSDQTV SGLKRQREKR 600 QTTTEKNISL SVLQQYFSGS LKDAAKAIGV CPTTLKRICR QHGISRWPSR KINKVNRSLR 660 KIKTVIDSVQ GVEGGLKFDP ITGGLVAATT FTPDHDAHNS FFSHKQQTTR NSDSGGQDVI 720 SVSSVPYIEC ENGIVKLEDD GCTMGRSQLG SIGRMLLNHT CKAEKGNSNI PLVELGSGPL 780 QEVGVESMPW ESIEDVSQSS YFAKRRCEGW ISNNGGACTV ETTSKLAVDE MDMGIEAYDG 840 VVEHNQPTCS DTTGSSNCSG SMVNGCTSSS LHTQNTSKSK SSASSESAIT VKATYKEDTV 900 RFKFEPFAGC QQLFEEVGKR FKLSTGTFQL KYLDDEQEWV MLVSESDLEE CLEILETIGS 960 RSMKLVVRDV PCVMGSSVSS NCLIT

Sequence ? help Back to Top

Protein Sequence Length: 985 aa Download sequence

MEFNYPVRDK GVNYWASSSS SSSAPVHIDG GFLDSSNQIS MDSFNNFSGL MNFDYSGGDG  60
EFCSGGSPDC FSVPSISDGF VTFSPLNFTS QSSCVFPMID GDGDGGGGCS PDAAAFSDKL  120
VFQQVDDTTQ VDLPLNESTD VNDSDGGQLS NNELSPVRMS DMMVDVVIPR PLSWTFSERM  180
LKALGMFKDS SGGGILAQVW VPVTQGNEIV LSTCEQPYLL DQMLEGYREV SRGFTFPAKE  240
KPGCYPGLPG RVFSSKLPEW TSNVMYYNMV EYLRVKYAID HEVRGSLALP IINPEDQSCC  300
AVLELVTVKE KSNFDPEIEN VCRALQSVNL KTIAPPRVHP QCFSMNQRAA LAEIVDVLRA  360
ACHAHRLPLA LTWIPCSYPD VAKNEHIEMS LRENKNSSSE KSVLCVEDTA CYVNNTDMQG  420
FVRACTEQFL EKGQGIVGRA LQSNHPFFSP DVKEYAIRDY PLVHHSRKYG LNAAVAIRLR  480
STYTGDDDYI LEFFLPINCT GSSEQQLLLN SLSNTMQRVC RSLRTVSNAE LVGVDESKLG  540
IQKGAPINLP SSVLSGNPNC RSDSAERLPL HLSDAMSDGT EADRSSDQTV SGLKRQREKR  600
QTTTEKNISL SVLQQYFSGS LKDAAKAIGV CPTTLKRICR QHGISRWPSR KINKVNRSLR  660
KIKTVIDSVQ GVEGGLKFDP ITGGLVAATT FTPDHDAHNS FFSHKQQTTR NSDSGGQDVI  720
SVSSVPYIEC ENGIVKLEDD GCTMGRSQLG SIGRMLLNHT CKAEKGNSNI PLVELGSGPL  780
QEVGVESMPW ESIEDVSQSS YFAKRRCEGW ISNNGGACTV ETTSKLAVDE MDMGIEAYDG  840
VVEHNQPTCS DTTGSSNCSG SMVNGCTSSS LHTQNTSKSK SSASSESAIT VKATYKEDTV  900
RFKFEPFAGC QQLFEEVGKR FKLSTGTFQL KYLDDEQEWV MLVSESDLEE CLEILETIGS  960
RSMKLVVRDV PCVMGSSVSS NCLIT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.1	0.0	Nin-like family protein