PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026389978.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 256aa MW: 29626.9 Da PI: 9.4995

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026389978.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	45.6	1.2e-14	21	102	9	97
HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 d r+++p +f +++ + ++s ++ + g W k+ +k++++++l++GW+ F ++ngL+ D +vF+++g ++f vkvf XP_026389978.1 21 DE---TRMRIPETFYPRISREAQSSEWALVQGLGGAHWVTKV--NKTQDGIYLEEGWEVFLQENGLQMYDYLVFRYHGCMQF--SVKVF 102 33...4689*******87777887888889******..******************************987888..77776 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MENFVNPDRK RHFYKVLLKE DETRMRIPET FYPRISREAQ SSEWALVQGL GGAHWVTKVN 60 KTQDGIYLEE GWEVFLQENG LQMYDYLVFR YHGCMQFSVK VFTISGGIPQ KECLAPVRAS 120 PLPEEGEESD EDDGDVARAN GIVRRFASRP GSRFFNVTVQ PSYLKCNYLP IPWGVRREHF 180 HDGLKKVTIV NSDASDTRAW RIKILRLQKD IRLSRGVADF ANKKNGLNLK VGDVCHFKIV 240 KKRSHQLVLQ VQVFHD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	241	245	KKRSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18090.1	9e-11	B3 family protein