PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026389980.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 233aa    MW: 26880.8 Da    PI: 9.5357
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026389980.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.61.6e-1126794097
                    ETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3 40 desgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
                     + g  W  k+  +k++++++l++GW+ F ++ngL+  D +vF+++g ++f   vkvf
  XP_026389980.1 26 GLGGAHWVTKV--NKTQDGIYLEEGWEVFLQENGLQMYDYLVFRYHGCMQF--SVKVF 79
                    567899*****..********************************987888..77776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MENFVNPDRK RHFYKVLLKE DETRMGLGGA HWVTKVNKTQ DGIYLEEGWE VFLQENGLQM  60
YDYLVFRYHG CMQFSVKVFT ISGGIPQKEC LAPVRASPLP EEGEESDEDD GDVARANGIV  120
RRFASRPGSR FFNVTVQPSY LKCNYLPIPW GVRREHFHDG LKKVTIVNSD ASDTRAWRIK  180
ILRLQKDIRL SRGVADFANK KNGLNLKVGD VCHFKIVKKR SHQLVLQVQV FHD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1218222KKRSH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53310.13e-08B3 family protein