PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026390006.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MIKC_MADS

Protein Properties

Length: 234aa MW: 27198.9 Da PI: 9.0667

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026390006.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	85.5	3.2e-27	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA+ELS+LC+aev ++ifsstgkl e+ss XP_026390006.1 10 RIDNTTSRQVTFSKRRNGLLKKAKELSILCEAEVGLVIFSSTGKLCEFSS 59 9***********************************************96 PP
2	K-box	76.7	6.3e-26	82	171	9	98
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++++a+ +++e+a L+ +++nLq+++R+l+G++L+sLs k Lq+Le+qLe sl+ +R +K++ l+++i+el +k + l++en++L kk XP_026390006.1 82 NANSEAKFWKREAAALRHQLQNLQENHRQLMGQELSSLSAKKLQNLENQLEMSLRGVRMQKDQKLTDEIHELNRKGNLLHQENMELFKKE 171 678999********************************************************************************9885 PP

Sequence ? help Back to Top
Protein Sequence Length: 234 aa Download sequence
MGRGKIVIQR IDNTTSRQVT FSKRRNGLLK KAKELSILCE AEVGLVIFSS TGKLCEFSSP 60 NMKSIIERYN KSKEDQHHPL MNANSEAKFW KREAAALRHQ LQNLQENHRQ LMGQELSSLS 120 AKKLQNLENQ LEMSLRGVRM QKDQKLTDEI HELNRKGNLL HQENMELFKK EHRICQENMD 180 LLRKINEARD ANETNRISHS PNGFNCEEDE CFKLQLCQPQ QQNYATPENP TKPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37940.1	1e-91	MIKC_MADS family protein