PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026390007.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MIKC_MADS

Protein Properties

Length: 231aa MW: 26786.4 Da PI: 9.5766

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026390007.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	88.1	4.8e-28	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA+ELS+LC+aev ++i+sstgklye+s+ XP_026390007.1 10 RIDNSTSRQVTFSKRRNGLLKKAKELSILCEAEVGLMIYSSTGKLYEFSN 59 9***********************************************95 PP
2	K-box	81.9	1.4e-27	79	167	9	97
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 +++++a+ +++e+a L+ +++nLq+++R+l+G++L+ Ls keLq+Le+qLe sl+ +R kK++ l+++i+el +k + l++en++L kk XP_026390007.1 79 NANSDAKFWKTEAASLRHQLQNLQENHRQLMGQELSGLSAKELQNLENQLEMSLRGVRMKKDQKLTDEIQELNRKGNLLHQENMELFKK 167 678999********************************************************************************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MGRGKIVIQR IDNSTSRQVT FSKRRNGLLK KAKELSILCE AEVGLMIYSS TGKLYEFSNP 60 NMKSIIERYN KSKVDPLMNA NSDAKFWKTE AASLRHQLQN LQENHRQLMG QELSGLSAKE 120 LQNLENQLEM SLRGVRMKKD QKLTDEIQEL NRKGNLLHQE NMELFKKEHH IRQEHMDLLK 180 KINEAKDANE TNRISHSPNG FNPEEDEFIK LQLSQPQQQN YVTPENPTTP S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37940.1	1e-92	MIKC_MADS family protein