PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026390009.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MIKC_MADS

Protein Properties

Length: 149aa MW: 17261.8 Da PI: 10.7016

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026390009.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	87.4	7.8e-28	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA+ELS+LC+aev + ifsstgklye+ss XP_026390009.1 10 RIDNSTSRQVTFSKRRNGLLKKAKELSILCEAEVGLTIFSSTGKLYEFSS 59 8***********************************************96 PP
2	K-box	66.1	1.2e-22	81	147	8	74
K-box 8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnelll 74 +++++a+ +++e+a L+ e+++Lq+++R+l+G++L+sLs+ke+q+Le+qLe sl+ +R +K++ l XP_026390009.1 81 INANSEAKFWKREAAALRHELQSLQENHRKLMGQELSSLSVKEIQNLENQLEMSLRGVRMQKDQSLQ 147 378999*********************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 149 aa Download sequence
MGRGKIVIRR IDNSTSRQVT FSKRRNGLLK KAKELSILCE AEVGLTIFSS TGKLYEFSST 60 NMKSIIERYN KSKEEQHHPV INANSEAKFW KREAAALRHE LQSLQENHRK LMGQELSSLS 120 VKEIQNLENQ LEMSLRGVRM QKDQSLQMR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37940.1	2e-73	MIKC_MADS family protein