PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026390010.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MIKC_MADS
Protein Properties Length: 239aa    MW: 27874.8 Da    PI: 10.3044
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026390010.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF92.61.9e-291059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    ri+n++ rqvtfskRrng+lKKA+ELS+LCda+v +iifsstgklye+ss
  XP_026390010.1 10 RIDNSTSRQVTFSKRRNGLLKKAKELSILCDAQVGLIIFSSTGKLYEFSS 59
                    8***********************************************96 PP
2K-box782.5e-2682170997
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                     +++++ + +++e+a L+ +++nLq++qR+l+G++L+sLs+keLq+Le+qLe sl+ +R +K++ l+++i+el +k + l++en++L +k
  XP_026390010.1  82 NATSEGKFWKREAATLRHQLQNLQENQRKLMGQELSSLSVKELQNLENQLEISLRGVRMQKDKKLTDKIHELNRKGNLLHQENMELLNK 170
                     6788899*******************************************************************************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MGRGKIVIRR IDNSTSRQVT FSKRRNGLLK KAKELSILCD AQVGLIIFSS TGKLYEFSST  60
NMKSIIERYN QSKEDQHHPI MNATSEGKFW KREAATLRHQ LQNLQENQRK LMGQELSSLS  120
VKELQNLENQ LEISLRGVRM QKDKKLTDKI HELNRKGNLL HQENMELLNK EHHIRQENMD  180
LLRKINEARD AHETNRISHA PNGFNLEEDE CIKLQLSQPQ QQDYSTPANP RTLSRLKLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37940.16e-91MIKC_MADS family protein