PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026390013.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MIKC_MADS

Protein Properties

Length: 143aa MW: 16484.9 Da PI: 10.7549

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026390013.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	94	7.1e-30	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA+ELS+LCda+v +iifsstgklye+ss XP_026390013.1 10 RIDNSTSRQVTFSKRRNGLLKKAKELSILCDAQVGLIIFSSTGKLYEFSS 59 8***********************************************96 PP
2	K-box	65.3	2.2e-22	82	142	9	69
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69 +++++a+ +++e+a L+ e+++Lq+++R+l+G++L+sLs+keLq+Le+qLe sl+ +R +K XP_026390013.1 82 NANSEAKFWKREAAALRHELQSLQENHRQLMGQELSSLSVKELQNLENQLEMSLRGVRMQK 142 788999****************************************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 143 aa Download sequence
MGRGKIVIRR IDNSTSRQVT FSKRRNGLLK KAKELSILCD AQVGLIIFSS TGKLYEFSST 60 NMKSTIERYN KSKEEQHHPL PNANSEAKFW KREAAALRHE LQSLQENHRQ LMGQELSSLS 120 VKELQNLENQ LEMSLRGVRM QKV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37940.1	7e-74	MIKC_MADS family protein