PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026390171.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family NF-YC
Protein Properties Length: 145aa    MW: 16636.2 Da    PI: 6.9801
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026390171.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC52.51.1e-16171041399
           NF-YC  13 atdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivprd 99 
                     + +  +  +Pl+rikki+k d+++++i +ea  l+s + +lf+  lt +s     e+kr+t+k   +  a +r + + dfl+d  p  
  XP_026390171.1  17 SRENLKSVFPLSRIKKIMKIDPEINKINSEALHLVSLSTDLFLQFLTEKSTRVVLEKKRKTIKFEHLRIAAKRHQpTSDFLLDSLPMP 104
                     33444568**********************************************************998887765389*****99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MAEAVEVVEI EEGEEESREN LKSVFPLSRI KKIMKIDPEI NKINSEALHL VSLSTDLFLQ  60
FLTEKSTRVV LEKKRKTIKF EHLRIAAKRH QPTSDFLLDS LPMPESNPSV GAEPQKRSES  120
HLEKPLPVGT RRIDQFFKKS VVEES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43250.17e-46NF-YC family protein