PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026390240.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 268aa    MW: 29965.8 Da    PI: 8.3597
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026390240.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260106.81.8e-3355151196
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeee.redamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     aCaaCk++r+kC+++C+l+p fp e+++kf++vhklFG+sn++kllk l++ + r++a++sl++eAear rdP++G +g ++k++ +l +l +++
  XP_026390240.1  55 ACAACKHQRKKCSQNCILSPFFPPEKKEKFQAVHKLFGVSNISKLLKGLHTLDeRKRAIDSLIWEAEARERDPIEGGFGAFKKINGELISLTNHV 149
                     7************************************************66554******************************99998888776 PP

          DUF260  95 al 96 
                       
  XP_026390240.1 150 RI 151
                     65 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MNLRFVLVYI FSFLFIPSQI CTIENDSRHS LSVESGSTMD EKNDVIKANS NPRQACAACK  60
HQRKKCSQNC ILSPFFPPEK KEKFQAVHKL FGVSNISKLL KGLHTLDERK RAIDSLIWEA  120
EARERDPIEG GFGAFKKING ELISLTNHVR ISNQPGLPKI GTNTISSDSK ALMSWENSAN  180
NGYAYGAYGN VSNVANNNYI PSNGRYNNNT NGYKQRNGHL DIKDSLSCLM NSFIVNIFNP  240
DQQNGVVNEK SDDSQSLVQE VMKDDPIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06280.15e-31LBD family protein