PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026390252.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 336aa    MW: 38378.3 Da    PI: 7.985
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026390252.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.73.2e-16115210295
                     EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                     +k+l++sdv+++gr+vlpkk  e+h  ++  +e++++ ++  +s ++W +++++  ++ks++yvl+ ++ e+vk+n+Lk gDfv+++  ++++++
  XP_026390252.1 115 QKELKNSDVNSLGRIVLPKKDSEAHlpSLTVKEGIQIAVREvLSPKVWFMRYRFwpNNKSRMYVLE-NTGEYVKQNELKCGDFVILY--QDENKQ 206
                     799************************666668889999997888*******9989999999**99.********************..556666 PP

                     .EEE CS
              B3  92 lvvk 95 
                     l+++
  XP_026390252.1 207 LYIS 210
                     6666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MGFFHRGFHS QRQIIATRHR FVDSSCRIQR PRRWGPSVTK AARIKRKMVR QRSLISARLG  60
LLSDTNAATS TNTTSAISLS SSRKQPLSST PTNQDNADVY TLMTPDNKRL KFILQKELKN  120
SDVNSLGRIV LPKKDSEAHL PSLTVKEGIQ IAVREVLSPK VWFMRYRFWP NNKSRMYVLE  180
NTGEYVKQNE LKCGDFVILY QDENKQLYIS FQKAQRPTLE GEPNKEEKES RTGLEREHES  240
PHAEVEDQRL LISEDMLRQQ GIGFHEPSTS SNTLAVEGDL FCLDGTIYLD LSNCNLSELD  300
ILPNFDDSDL SLYDDLIDDF NQDFGTAKAD PSKTAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28300.19e-44B3 family protein