PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026390253.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 276aa    MW: 31999.2 Da    PI: 7.1821
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026390253.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.32.2e-1655150295
                     EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                     +k+l++sdv+++gr+vlpkk  e+h  ++  +e++++ ++  +s ++W +++++  ++ks++yvl+ ++ e+vk+n+Lk gDfv+++  ++++++
  XP_026390253.1  55 QKELKNSDVNSLGRIVLPKKDSEAHlpSLTVKEGIQIAVREvLSPKVWFMRYRFwpNNKSRMYVLE-NTGEYVKQNELKCGDFVILY--QDENKQ 146
                     799************************666668889999997888*******9989999999**99.********************..556666 PP

                     .EEE CS
              B3  92 lvvk 95 
                     l+++
  XP_026390253.1 147 LYIS 150
                     6666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MGFFHRGFHS QRQIIATRHR FVDSSCRIQR PRRWGPSVTK AARIKRKMRL KFILQKELKN  60
SDVNSLGRIV LPKKDSEAHL PSLTVKEGIQ IAVREVLSPK VWFMRYRFWP NNKSRMYVLE  120
NTGEYVKQNE LKCGDFVILY QDENKQLYIS FQKAQRPTLE GEPNKEEKES RTGLEREHES  180
PHAEVEDQRL LISEDMLRQQ GIGFHEPSTS SNTLAVEGDL FCLDGTIYLD LSNCNLSELD  240
ILPNFDDSDL SLYDDLIDDF NQDFGTAKAD PSKTAK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14349RIKRKMR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28300.12e-40B3 family protein