PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026390272.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 362aa MW: 40902.5 Da PI: 7.5759

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026390272.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	63.1	5.4e-20	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lvd+v+++G g+W+t ++ g+ R++k+c++rw +yl XP_026390272.1 14 KGPWTPEEDQKLVDYVQKHGHGSWRTLPKNAGLQRCGKSCRLRWANYL 61 79********************************************97 PP
2	Myb_DNA-binding	54.9	2e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W+tIa++++ gRt++++k++w+++ XP_026390272.1 67 RGRFSFEEEETIIQLHSVLGNK-WSTIAARLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MGRAPCCDKN GLKKGPWTPE EDQKLVDYVQ KHGHGSWRTL PKNAGLQRCG KSCRLRWANY 60 LRPDIKRGRF SFEEEETIIQ LHSVLGNKWS TIAARLPGRT DNEIKNYWNT HIRKRLLKSG 120 IDPVTHTPRL DLLDLSSILR SSICNSPQLM NISGLLGLQS LVNPDLMRLL NTLVTCQRGR 180 QDYSLQNLQD NQVSKPQNQN HQFSSFQPNH QMQSSNHQQT PLLAASSTAA FAQFLNEAQQ 240 VLQGNEQSSS INLDSVNSQH TMRQNHNVGF TSNSTENVVH FQSNQDYGSD QVFINSLPGN 300 SNFQLNNYIN QDSFGLNSVL STPTSSQTPM NSSNATEDER DSYCSDFLQF QIPDMLDING 360 FM

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MGRAPCCDKN GLKKGPWTPE EDQKLVDYVQ KHGHGSWRTL PKNAGLQRCG KSCRLRWANY  60
LRPDIKRGRF SFEEEETIIQ LHSVLGNKWS TIAARLPGRT DNEIKNYWNT HIRKRLLKSG  120
IDPVTHTPRL DLLDLSSILR SSICNSPQLM NISGLLGLQS LVNPDLMRLL NTLVTCQRGR  180
QDYSLQNLQD NQVSKPQNQN HQFSSFQPNH QMQSSNHQQT PLLAASSTAA FAQFLNEAQQ  240
VLQGNEQSSS INLDSVNSQH TMRQNHNVGF TSNSTENVVH FQSNQDYGSD QVFINSLPGN  300
SNFQLNNYIN QDSFGLNSVL STPTSSQTPM NSSNATEDER DSYCSDFLQF QIPDMLDING  360
FM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	1e-98	MYB family protein