PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026390285.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 237aa    MW: 27197 Da    PI: 5.0243
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026390285.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF48.31.3e-15959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    k+i+++  rq  +++R+ g+ KKA EL +LC+++va+ +fs+ g+  +++s
  XP_026390285.1  9 KKIKEYGPRQGVYTNRKSGVVKKADELAILCNIDVALTMFSPAGRPTTFAS 59
                    67899999*************************************999985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MGRAKLEIKK IKEYGPRQGV YTNRKSGVVK KADELAILCN IDVALTMFSP AGRPTTFASN  60
GRSEEIYLRY FRSPETRRGH VLDASPILGR LKYLKREREL METISRREAL KEEINLINEK  120
VKDTSDKLRI YIPVVEDIRS IMVAEFYERI LAYSLLRLEV QWDELTREWV NNVPQHSAES  180
IKIPVEDIEN METMLVDSAD SEQINELLGK GKVVESVNDP EAEKDNLASE VAYEGYA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22130.11e-20MIKC_MADS family protein