PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026390292.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

CO-like

Protein Properties

Length: 421aa MW: 46550.1 Da PI: 4.9673

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026390292.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.2	1.2e-06	2	35	3	36
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg 36 ++ C++++ +++ +C+ ++ lC +C + H+ XP_026390292.1 2 NPLCQLCGIEKALVYCTPDDARLCLQCDTVVHSA 35 579***999****************99954 PP
2	CCT	64.1	4.1e-22	365	408	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Re+a++RYkeK+ktR F K+irY+sRKa+A++R+RvKGrFvk+ XP_026390292.1 365 REKAKMRYKEKKKTRTFGKQIRYASRKARADTRKRVKGRFVKAG 408 99***************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MNPLCQLCGI EKALVYCTPD DARLCLQCDT VVHSANRVSQ RHLRGIMCDR CYSRPASIRC 60 TENSFSFCEN CRSNQKGCLV PSHPHLQLPC YPLCPSEFWK LFPFAFDASF LNGVDSGPLL 120 SVSGGILSTI EHCLSNGWDS GENGNPVVNV LNDMGPCTKF EPSINPPIAF ENTPGSMSYN 180 KNQPDLFHKE TDFSPEGLSQ FKDIELCEDN DICEGFNIAD VDLSFDGDNL FGCAQSNPKF 240 IPGMDCFNLD KDTQVVDSLH LHENDIEVSS SMQPDCAGLQ SSCVTGSVSV LQCVNSSMDE 300 VLLNATGGNR SINLSFSNEP QTPSLSNITG ERRASDYQDC GVSSIFLTGE SSWDPSLETG 360 SPQAREKAKM RYKEKKKTRT FGKQIRYASR KARADTRKRV KGRFVKAGEA YDYDPLPSRD 420 Y

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MNPLCQLCGI EKALVYCTPD DARLCLQCDT VVHSANRVSQ RHLRGIMCDR CYSRPASIRC  60
TENSFSFCEN CRSNQKGCLV PSHPHLQLPC YPLCPSEFWK LFPFAFDASF LNGVDSGPLL  120
SVSGGILSTI EHCLSNGWDS GENGNPVVNV LNDMGPCTKF EPSINPPIAF ENTPGSMSYN  180
KNQPDLFHKE TDFSPEGLSQ FKDIELCEDN DICEGFNIAD VDLSFDGDNL FGCAQSNPKF  240
IPGMDCFNLD KDTQVVDSLH LHENDIEVSS SMQPDCAGLQ SSCVTGSVSV LQCVNSSMDE  300
VLLNATGGNR SINLSFSNEP QTPSLSNITG ERRASDYQDC GVSSIFLTGE SSWDPSLETG  360
SPQAREKAKM RYKEKKKTRT FGKQIRYASR KARADTRKRV KGRFVKAGEA YDYDPLPSRD  420
Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21880.1	4e-63	CO-like family protein