PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026390305.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB_related
Protein Properties Length: 75aa    MW: 8500.26 Da    PI: 4.1942
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026390305.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.14.6e-092668145
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     r+ +++ E+ l++  +++ G + W +Ia +++ gRt++++  +w 
   XP_026390305.1 26 RLHFSEAEETLIILMHNLVGER-WPLIAGRIP-GRTAEEIEKYWT 68
                     7889******************.*********.***********5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 75 aa     Download sequence    
MANLDDQSSV DTSVDSQEEN SNTGSRLHFS EAEETLIILM HNLVGERWPL IAGRIPGRTA  60
EEIEKYWTSR YSTSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01380.17e-16MYB_related family protein