PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026390384.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

CAMTA

Protein Properties

Length: 864aa MW: 99406.9 Da PI: 8.5355

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026390384.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	152.8	7.9e-48	32	145	3	116
CG-1 3 kekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 + ++rw +++e++aiL n++ + +++++ + pk g+++Ly+rkk+r frkDGy+w+kkkdgktv+E he+LKvg e +++yY+h+ +np++ rr XP_026390384.1 32 DANERWFRPNEVHAILSNYKYFGIHHKPVNLPKGGTIVLYDRKKLRAFRKDGYNWRKKKDGKTVQEGHEHLKVGREERIHVYYVHGLDNPNLARR 126 3489***************************************************************************************** PP CG-1 98 cywlLeeelekivlvhyle 116 cywlL++++e+iv+vhy+e XP_026390384.1 127 CYWLLDKKQEDIVFVHYRE 145 ***************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 864 aa Download sequence
MESSIHGDRL VGWEIHGFLT MKDLDIQKLL EDANERWFRP NEVHAILSNY KYFGIHHKPV 60 NLPKGGTIVL YDRKKLRAFR KDGYNWRKKK DGKTVQEGHE HLKVGREERI HVYYVHGLDN 120 PNLARRCYWL LDKKQEDIVF VHYRELEQVQ SSPSTPHNSN SNSAHCSNAS VPKVLADEKS 180 CWESPASNSN GVSYEQQNQY NVRNSKSDTS DYSQARNITV QTNDFQSATG DESSSMLIKE 240 ILQNEESFEV FLDSFMADAS DLSDLPDDSS LLTSHNESGT SMIVNHQLQT IKPLFTITDI 300 SPSWAYSTEQ TKIIAIGYFH GAYLHIDDTR MFCVFGDVCS PAEKIAMGVF RCTSFPRYPG 360 FVNFYLSLDG YTPISQVLSF EYRFPPVERM ALLNEHPKQE EFQLQLRLLR LLFSSSNILR 420 VLSRKSTSAY LETKLLPSVS SSIDKDWEFL NESIQHNKIS MSQSTNMLTE FTLKSKLKEW 480 ILERVVEGRK TSARDHHGLG IIHLCTLLDY KWAVQLYSRS GLSLDFRDAF GWTALHWAAF 540 YGRKEMVAVL LSEGADPSLV TDPTSQFPGG CTAADIASRN GHEGIAAYLA KQGLITQFML 600 MSVSENKSGP LQTQKSYSVD PGNLSEEQLC QKDAFDAYEI STDVASRIQE AFWKVLVSKT 660 NRMTIQDTDE DYVTNADLAS LSLHSPEAIR HTQMFAEACY TMAAMKIQHA FRIYMIRKRM 720 KAASRIQHQF LTWRIRKDFL NKRLQVVKLQ ANFRGHRARN QVNRIVWAVG VLEKAILRWR 780 QKGKGLRGLI LPQSTEKVRV QEGIQAEYGL HEDFFLDSRK QTEERLSRAV ICVQSMFRSK 840 RAREEYRMMK LTHDREKLER RQMQ

Sequence ? help Back to Top

Protein Sequence Length: 864 aa Download sequence

MESSIHGDRL VGWEIHGFLT MKDLDIQKLL EDANERWFRP NEVHAILSNY KYFGIHHKPV  60
NLPKGGTIVL YDRKKLRAFR KDGYNWRKKK DGKTVQEGHE HLKVGREERI HVYYVHGLDN  120
PNLARRCYWL LDKKQEDIVF VHYRELEQVQ SSPSTPHNSN SNSAHCSNAS VPKVLADEKS  180
CWESPASNSN GVSYEQQNQY NVRNSKSDTS DYSQARNITV QTNDFQSATG DESSSMLIKE  240
ILQNEESFEV FLDSFMADAS DLSDLPDDSS LLTSHNESGT SMIVNHQLQT IKPLFTITDI  300
SPSWAYSTEQ TKIIAIGYFH GAYLHIDDTR MFCVFGDVCS PAEKIAMGVF RCTSFPRYPG  360
FVNFYLSLDG YTPISQVLSF EYRFPPVERM ALLNEHPKQE EFQLQLRLLR LLFSSSNILR  420
VLSRKSTSAY LETKLLPSVS SSIDKDWEFL NESIQHNKIS MSQSTNMLTE FTLKSKLKEW  480
ILERVVEGRK TSARDHHGLG IIHLCTLLDY KWAVQLYSRS GLSLDFRDAF GWTALHWAAF  540
YGRKEMVAVL LSEGADPSLV TDPTSQFPGG CTAADIASRN GHEGIAAYLA KQGLITQFML  600
MSVSENKSGP LQTQKSYSVD PGNLSEEQLC QKDAFDAYEI STDVASRIQE AFWKVLVSKT  660
NRMTIQDTDE DYVTNADLAS LSLHSPEAIR HTQMFAEACY TMAAMKIQHA FRIYMIRKRM  720
KAASRIQHQF LTWRIRKDFL NKRLQVVKLQ ANFRGHRARN QVNRIVWAVG VLEKAILRWR  780
QKGKGLRGLI LPQSTEKVRV QEGIQAEYGL HEDFFLDSRK QTEERLSRAV ICVQSMFRSK  840
RAREEYRMMK LTHDREKLER RQMQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	73	90	RKKLRAFRKDGYNWRKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16940.1	0.0	CAMTA family protein