PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026390385.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

CAMTA

Protein Properties

Length: 777aa MW: 89017.1 Da PI: 8.5451

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026390385.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	47.4	3.7e-15	16	58	74	116
CG-1 74 KvggvevlycyYahseenptfqrrcywlLeeelekivlvhyle 116 Kvg e +++yY+h+ +np++ rrcywlL++++e+iv+vhy+e XP_026390385.1 16 KVGREERIHVYYVHGLDNPNLARRCYWLLDKKQEDIVFVHYRE 58 8999*************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 777 aa Download sequence
MGIIGGRRKM GKQFKKVGRE ERIHVYYVHG LDNPNLARRC YWLLDKKQED IVFVHYRELE 60 QVQSSPSTPH NSNSNSAHCS NASVPKVLAD EKSCWESPAS NSNGVSYEQQ NQYNVRNSKS 120 DTSDYSQARN ITVQTNDFQS ATGDESSSML IKEILQNEES FEVFLDSFMA DASDLSDLPD 180 DSSLLTSHNE SGTSMIVNHQ LQTIKPLFTI TDISPSWAYS TEQTKIIAIG YFHGAYLHID 240 DTRMFCVFGD VCSPAEKIAM GVFRCTSFPR YPGFVNFYLS LDGYTPISQV LSFEYRFPPV 300 ERMALLNEHP KQEEFQLQLR LLRLLFSSSN ILRVLSRKST SAYLETKLLP SVSSSIDKDW 360 EFLNESIQHN KISMSQSTNM LTEFTLKSKL KEWILERVVE GRKTSARDHH GLGIIHLCTL 420 LDYKWAVQLY SRSGLSLDFR DAFGWTALHW AAFYGRKEMV AVLLSEGADP SLVTDPTSQF 480 PGGCTAADIA SRNGHEGIAA YLAKQGLITQ FMLMSVSENK SGPLQTQKSY SVDPGNLSEE 540 QLCQKDAFDA YEISTDVASR IQEAFWKVLV SKTNRMTIQD TDEDYVTNAD LASLSLHSPE 600 AIRHTQMFAE ACYTMAAMKI QHAFRIYMIR KRMKAASRIQ HQFLTWRIRK DFLNKRLQVV 660 KLQANFRGHR ARNQVNRIVW AVGVLEKAIL RWRQKGKGLR GLILPQSTEK VRVQEGIQAE 720 YGLHEDFFLD SRKQTEERLS RAVICVQSMF RSKRAREEYR MMKLTHDREK LERRQMQ

Sequence ? help Back to Top

Protein Sequence Length: 777 aa Download sequence

MGIIGGRRKM GKQFKKVGRE ERIHVYYVHG LDNPNLARRC YWLLDKKQED IVFVHYRELE  60
QVQSSPSTPH NSNSNSAHCS NASVPKVLAD EKSCWESPAS NSNGVSYEQQ NQYNVRNSKS  120
DTSDYSQARN ITVQTNDFQS ATGDESSSML IKEILQNEES FEVFLDSFMA DASDLSDLPD  180
DSSLLTSHNE SGTSMIVNHQ LQTIKPLFTI TDISPSWAYS TEQTKIIAIG YFHGAYLHID  240
DTRMFCVFGD VCSPAEKIAM GVFRCTSFPR YPGFVNFYLS LDGYTPISQV LSFEYRFPPV  300
ERMALLNEHP KQEEFQLQLR LLRLLFSSSN ILRVLSRKST SAYLETKLLP SVSSSIDKDW  360
EFLNESIQHN KISMSQSTNM LTEFTLKSKL KEWILERVVE GRKTSARDHH GLGIIHLCTL  420
LDYKWAVQLY SRSGLSLDFR DAFGWTALHW AAFYGRKEMV AVLLSEGADP SLVTDPTSQF  480
PGGCTAADIA SRNGHEGIAA YLAKQGLITQ FMLMSVSENK SGPLQTQKSY SVDPGNLSEE  540
QLCQKDAFDA YEISTDVASR IQEAFWKVLV SKTNRMTIQD TDEDYVTNAD LASLSLHSPE  600
AIRHTQMFAE ACYTMAAMKI QHAFRIYMIR KRMKAASRIQ HQFLTWRIRK DFLNKRLQVV  660
KLQANFRGHR ARNQVNRIVW AVGVLEKAIL RWRQKGKGLR GLILPQSTEK VRVQEGIQAE  720
YGLHEDFFLD SRKQTEERLS RAVICVQSMF RSKRAREEYR MMKLTHDREK LERRQMQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	6	13	GRRKMGKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16940.1	0.0	CAMTA family protein