PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026390405.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 245aa    MW: 28475 Da    PI: 6.677
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026390405.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.54.9e-08150190954
                     HHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                      r RR+ri +++  L++l+P  a      K++ a++L +Av+Y+k L
  XP_026390405.1 150 ARHRRERISERMRILQRLVPGgA------KMDTASMLDEAVRYVKFL 190
                     699*****************966......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MDTTRHDSMP RNNTWDNLVM ASMEQSTPIS TPYLHDDQLA YDVIFENFHS QQITQPTSSC  60
SSHYAPIHSD HHEHQQQQLI RTLSYCSEEK KQEKCEKGSS EEEEEEELDA MKEMMYRIAA  120
MQPIDIDPAT LSKPKRRNVR ISNDPQSVAA RHRRERISER MRILQRLVPG GAKMDTASML  180
DEAVRYVKFL KKQVIKLQSS NQNSPRLAVP IINDDYRWHV PSSENNIVTF TETTPQKAKD  240
YCIPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09750.16e-39bHLH family protein