PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026390408.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 335aa    MW: 39207.9 Da    PI: 5.5505
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026390408.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.61.5e-1513102197
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffkvl+  d     r+++p  f  ++++ +++    +l  +sg  W  k+  +k+++ ++l+kGW+ Fv+ ng++  Df+vF+++g+++f   +k
  XP_026390408.1  13 FFKVLLEDDL---TRMRIPEAFYPRISKASQSCERAVLWGPSGTHWVAKV--KKSQDVIYLEKGWEVFVQVNGIQKYDFLVFRYEGSMQF--SIK 100
                     6666643333...4689*********777777789***************..999999***************************99999..666 PP

                     EE CS
              B3  96 vf 97 
                     vf
  XP_026390408.1 101 VF 102
                     66 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MRKFVDPDGK HHFFKVLLED DLTRMRIPEA FYPRISKASQ SCERAVLWGP SGTHWVAKVK  60
KSQDVIYLEK GWEVFVQVNG IQKYDFLVFR YEGSMQFSIK VFNMHGVPRE ECLAPVRSSP  120
LVEEKIKHGR SFDCPPSGRP STSLRSRKRR CVELQERVQQ DRDESDEDES DEKDKSDEDE  180
WDEDESDEDE SDEDESDEGE SDEDGLDEED EDCVARTNGR KRGLSSRSHS AFFRIPMRAA  240
YLKHNYVPIP WGIRREYFLD DVKKVIIIPS DASSYDREWR IRILHTKTDM RLSKGVTDFT  300
KKKNGFNLKA GDVCHFEVVE KRSYKLVLRV WKSCT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1147175RKRRCVELQERVQQDRDESDEDESDEKDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18090.11e-10B3 family protein