PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026390428.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 247aa    MW: 27268.2 Da    PI: 9.697
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026390428.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.55.8e-1472118455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      h ++Er+RR+++N++f  L  ++P +     kK++Ka++L  A++Y+k+Lq
  XP_026390428.1  72 DHVMAERKRRQKLNQRFIALSAVVPGL-----KKMDKASVLGDAIKYLKQLQ 118
                     599************************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MDSLQALQVC GNVVGDHVNP REEVVSPGNK KMMFPSDVSY LNVVNSASKG NQHGKKSTVA  60
AMINNQQSCT KDHVMAERKR RQKLNQRFIA LSAVVPGLKK MDKASVLGDA IKYLKQLQEK  120
AKTLEEQTTK KTVESVIFLK KTQIYADDKN SSSSNENSVA GSTYDEPLPE IEARVSHNNV  180
LIRIHCEKHN GVFAKVLSQI EKLHLSVINS NAIPFDDSSL AITIAAQMNA EYSMTVKDLV  240
KSLRSVV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17782ERKRRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.12e-56bHLH family protein