PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026390431.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 237aa    MW: 26372.9 Da    PI: 9.657
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026390431.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF71.66.7e-231765149
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                    krie +  rqvtfskRr g++KKA+EL++LC+ae+a+i+fs+ gk + +
  XP_026390431.1 17 KRIEKEDARQVTFSKRRGGLIKKAHELCTLCGAEIAIIVFSPAGKPFSF 65
                    79******************************************97666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MAVTRKPSMG RQKIEIKRIE KEDARQVTFS KRRGGLIKKA HELCTLCGAE IAIIVFSPAG  60
KPFSFIHPES VIDRYLSGNS LQENMTPTPL VSAHRDAKIR ELNKEYTEAL NKLEAEKKRG  120
AALKKMKKAS RKQFWWDPID DLGVHELEQL SSAIDELKNQ VAERADELLL GSSSSMSFLP  180
GNNSSNGMSS TSHSEYSSTT TYETKPAIPN HQILTSSLPH HGSYGTGFGF YGRNGLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.16e-38M-type_MADS family protein