PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026390443.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 162aa    MW: 18575.1 Da    PI: 9.3093
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026390443.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF27.83.3e-092163345
                    --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                     e ++ rqvtf+k    i K  +EL +L +ae+ +i fs++g+
  XP_026390443.1 21 LEKEIARQVTFTKLSSNIVKQGNELRTLYGAEITLIFFSPEGQ 63
                    578899***********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MASSSKTKKS KGRRNTETKM LEKEIARQVT FTKLSSNIVK QGNELRTLYG AEITLIFFSP  60
EGQPFSYGDP SVIDRYLSDV KDTSEDAVVT AQCNARIAEL NIEYNKALKK LEAEKKRGKQ  120
LAEERKDNNS KYWWDRPVDE LSLEQLETLV LRLGELKIQL KD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.16e-24M-type_MADS family protein