PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026390585.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 232aa    MW: 26085.8 Da    PI: 9.168
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026390585.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26059.59.5e-19397197
          DUF260  1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97
                    +C+ C++ +++C++dC + +yfpa ++ +f +v+ +FG  + l++++++pe+  + a +sl+ +A+ar+ d v+G  g+  +l++++++l+ael ++
  XP_026390585.1  3 PCEKCRHNQKRCPADCSYVQYFPAGRRDDFVAVNVVFGSIKFLSVVNEAPEQ--NLASESLIRHARARIADRVNGFSGTAYQLRNRVNELRAELTER 97
                    7**********************************************97765..6799***********************************9875 PP
2DUF26062.79.3e-20126223198
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +C aC+++r++C+++C l+ +f  +++++++nv  l+G+ +  + +++++  er+ a++ ++ e++a+ + P +G   +i++l+q++++l   l+
  XP_026390585.1 126 PCGACRHQRKQCPANCSLRAIFTPQRNADLNNVLALYGVPKFKSNMDRVDAAERRLAAERMIQESRAWNEFPGRGFEVLINTLNQEVQRLTRTLE 220
                     7*****************************************************************************************99998 PP

          DUF260  96 llk 98 
                     l+k
  XP_026390585.1 221 LAK 223
                     876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MAPCEKCRHN QKRCPADCSY VQYFPAGRRD DFVAVNVVFG SIKFLSVVNE APEQNLASES  60
LIRHARARIA DRVNGFSGTA YQLRNRVNEL RAELTERGIP IGGDIIPQIE AEQLEAEQPV  120
VHNGGPCGAC RHQRKQCPAN CSLRAIFTPQ RNADLNNVLA LYGVPKFKSN MDRVDAAERR  180
LAAERMIQES RAWNEFPGRG FEVLINTLNQ EVQRLTRTLE LAKLPFKKRL GG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50510.16e-14LBD family protein